Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABD31535.1Conserved hypothetical protein. (295 aa)    
Predicted Functional Partners:
tcaA
Conserved hypothetical protein; Plays a major role in decreasing resistance to glycopeptide antibiotics; Belongs to the TcaA family.
  
     0.772
ABD30116.1
Transcriptional regulator, MarR family, putative.
  
     0.769
ABD31296.1
Conserved hypothetical protein.
  
     0.764
tagX
tagX protein, putative; Belongs to the glycosyltransferase 2 family.
  
     0.762
ABD30587.1
Conserved hypothetical protein.
  
     0.759
ABD31195.1
Conserved hypothetical protein.
  
     0.754
ABD32012.1
Conserved hypothetical protein.
  
     0.742
ABD29816.1
Conserved hypothetical protein.
  
     0.736
ABD31186.1
Conserved hypothetical protein.
  
     0.736
ABD30938.1
Conserved hypothetical protein.
  
     0.733
Your Current Organism:
Staphylococcus aureus
NCBI taxonomy Id: 93061
Other names: S. aureus subsp. aureus NCTC 8325, Staphylococcus aureus NCTC 8325, Staphylococcus aureus subsp. aureus NCTC 8325, Staphylococcus aureus subsp. aureus str. NCTC 8325, Staphylococcus aureus subsp. aureus strain NCTC 8325
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