Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABD31628.1Conserved hypothetical protein. (299 aa)    
Predicted Functional Partners:
ABD31627.1
Conserved hypothetical protein.
 
  
 0.989
ABD29317.1
Conserved hypothetical protein.
 
    
0.862
ABD29786.1
Iron compound ABC transporter, ATP-binding protein.
 
    
0.850
ABD31626.1
Hypothetical protein.
       0.773
ABD31625.1
Conserved hypothetical protein.
       0.726
ABD31624.1
Aldose 1-epimerase precursor, putative.
       0.669
ABD31629.1
Conserved hypothetical protein.
       0.573
ABD29744.1
Conserved hypothetical protein.
   
    0.438
Your Current Organism:
Staphylococcus aureus
NCBI taxonomy Id: 93061
Other names: S. aureus subsp. aureus NCTC 8325, Staphylococcus aureus NCTC 8325, Staphylococcus aureus subsp. aureus NCTC 8325, Staphylococcus aureus subsp. aureus str. NCTC 8325, Staphylococcus aureus subsp. aureus strain NCTC 8325
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