Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABD31672.1Transcriptional regulator, putative. (701 aa)    
Predicted Functional Partners:
ABD31195.1
Conserved hypothetical protein.
  
     0.697
ABD31296.1
Conserved hypothetical protein.
  
     0.667
tagX
tagX protein, putative; Belongs to the glycosyltransferase 2 family.
  
     0.662
ABD31535.1
Conserved hypothetical protein.
  
     0.652
ABD30116.1
Transcriptional regulator, MarR family, putative.
  
    0.647
tcaA
Conserved hypothetical protein; Plays a major role in decreasing resistance to glycopeptide antibiotics; Belongs to the TcaA family.
  
     0.643
ABD29816.1
Conserved hypothetical protein.
  
     0.613
ABD30938.1
Conserved hypothetical protein.
  
     0.599
lipA-2
Lipase.
  
     0.581
ABD31582.1
Conserved hypothetical protein.
  
     0.575
Your Current Organism:
Staphylococcus aureus
NCBI taxonomy Id: 93061
Other names: S. aureus subsp. aureus NCTC 8325, Staphylococcus aureus NCTC 8325, Staphylococcus aureus subsp. aureus NCTC 8325, Staphylococcus aureus subsp. aureus str. NCTC 8325, Staphylococcus aureus subsp. aureus strain NCTC 8325
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