Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABD31827.1Conserved hypothetical protein. (290 aa)    
Predicted Functional Partners:
ABD31826.1
Conserved hypothetical protein.
    0.990
ABD31828.1
Conserved hypothetical protein.
 
     0.717
ABD31830.1
Conserved hypothetical protein.
 
    0.678
ABD29488.1
Conserved hypothetical protein.
 
    0.669
ABD30268.1
Conserved hypothetical protein.
  
    0.651
ABD29959.1
Conserved hypothetical protein.
   
  
 0.620
ABD31982.1
Conserved hypothetical protein.
 
    0.579
ABD29489.1
NADPH-dependent FMN reductase, putative.
  
  
 0.556
ABD29303.1
Capsular polysaccharide biosynthesis protein Cap5I, putative.
      
 0.470
ABD29304.1
Capsular polysaccharide biosynthesis protein Cap5J, putative.
      
 0.470
Your Current Organism:
Staphylococcus aureus
NCBI taxonomy Id: 93061
Other names: S. aureus subsp. aureus NCTC 8325, Staphylococcus aureus NCTC 8325, Staphylococcus aureus subsp. aureus NCTC 8325, Staphylococcus aureus subsp. aureus str. NCTC 8325, Staphylococcus aureus subsp. aureus strain NCTC 8325
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