Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABD31893.1Conserved hypothetical protein. (185 aa)    
Predicted Functional Partners:
ABD31894.1
Conserved hypothetical protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
     0.855
ABD31895.1
Conserved hypothetical protein.
 
     0.742
ABD31892.1
Conserved hypothetical protein.
       0.666
ABD31896.1
Conserved hypothetical protein; Belongs to the AB hydrolase superfamily.
 
     0.659
ABD31891.1
Conserved hypothetical protein.
 
     0.639
ABD31890.1
Conserved hypothetical protein.
       0.522
icaR
Ica operon transcriptional regulator IcaR, putative; Represses transcription of the icaADBC operon necessary for biofilm production.
  
     0.440
ABD29324.1
Conserved hypothetical protein; Belongs to the ATP-dependent AMP-binding enzyme family.
  
   
 0.401
Your Current Organism:
Staphylococcus aureus
NCBI taxonomy Id: 93061
Other names: S. aureus subsp. aureus NCTC 8325, Staphylococcus aureus NCTC 8325, Staphylococcus aureus subsp. aureus NCTC 8325, Staphylococcus aureus subsp. aureus str. NCTC 8325, Staphylococcus aureus subsp. aureus strain NCTC 8325
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