Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABD29324.1 | ABD31891.1 | SAOUHSC_00144 | SAOUHSC_02895 | Conserved hypothetical protein; Belongs to the ATP-dependent AMP-binding enzyme family. | Conserved hypothetical protein. | 0.858 |
ABD29324.1 | ABD31893.1 | SAOUHSC_00144 | SAOUHSC_02897 | Conserved hypothetical protein; Belongs to the ATP-dependent AMP-binding enzyme family. | Conserved hypothetical protein. | 0.406 |
ABD29324.1 | ABD31894.1 | SAOUHSC_00144 | SAOUHSC_02898 | Conserved hypothetical protein; Belongs to the ATP-dependent AMP-binding enzyme family. | Conserved hypothetical protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.880 |
ABD29324.1 | ABD31896.1 | SAOUHSC_00144 | SAOUHSC_02900 | Conserved hypothetical protein; Belongs to the ATP-dependent AMP-binding enzyme family. | Conserved hypothetical protein; Belongs to the AB hydrolase superfamily. | 0.889 |
ABD29324.1 | icaR | SAOUHSC_00144 | SAOUHSC_03001 | Conserved hypothetical protein; Belongs to the ATP-dependent AMP-binding enzyme family. | Ica operon transcriptional regulator IcaR, putative; Represses transcription of the icaADBC operon necessary for biofilm production. | 0.463 |
ABD31890.1 | ABD31891.1 | SAOUHSC_02894 | SAOUHSC_02895 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.828 |
ABD31890.1 | ABD31892.1 | SAOUHSC_02894 | SAOUHSC_02896 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.760 |
ABD31890.1 | ABD31893.1 | SAOUHSC_02894 | SAOUHSC_02897 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.553 |
ABD31890.1 | ABD31894.1 | SAOUHSC_02894 | SAOUHSC_02898 | Conserved hypothetical protein. | Conserved hypothetical protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.480 |
ABD31891.1 | ABD29324.1 | SAOUHSC_02895 | SAOUHSC_00144 | Conserved hypothetical protein. | Conserved hypothetical protein; Belongs to the ATP-dependent AMP-binding enzyme family. | 0.858 |
ABD31891.1 | ABD31890.1 | SAOUHSC_02895 | SAOUHSC_02894 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.828 |
ABD31891.1 | ABD31892.1 | SAOUHSC_02895 | SAOUHSC_02896 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.812 |
ABD31891.1 | ABD31893.1 | SAOUHSC_02895 | SAOUHSC_02897 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.661 |
ABD31891.1 | ABD31894.1 | SAOUHSC_02895 | SAOUHSC_02898 | Conserved hypothetical protein. | Conserved hypothetical protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.762 |
ABD31891.1 | ABD31895.1 | SAOUHSC_02895 | SAOUHSC_02899 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.630 |
ABD31891.1 | ABD31896.1 | SAOUHSC_02895 | SAOUHSC_02900 | Conserved hypothetical protein. | Conserved hypothetical protein; Belongs to the AB hydrolase superfamily. | 0.650 |
ABD31892.1 | ABD31890.1 | SAOUHSC_02896 | SAOUHSC_02894 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.760 |
ABD31892.1 | ABD31891.1 | SAOUHSC_02896 | SAOUHSC_02895 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.812 |
ABD31892.1 | ABD31893.1 | SAOUHSC_02896 | SAOUHSC_02897 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.636 |
ABD31892.1 | ABD31894.1 | SAOUHSC_02896 | SAOUHSC_02898 | Conserved hypothetical protein. | Conserved hypothetical protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.603 |
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