STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABD31930.1Conserved hypothetical protein; Belongs to the GbsR family. (187 aa)    
Predicted Functional Partners:
ABD31928.1
Betaine aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
 
     0.686
betA
Choline dehydrogenase; Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate.
 
   
 0.646
ABD30248.1
Conserved hypothetical protein.
  
     0.615
ABD31929.1
Conserved hypothetical protein.
       0.541
ABD30153.1
Cytochrome d ubiquinol oxidase, subunit II, putative.
 
   
 0.534
ABD30015.1
Conserved hypothetical protein.
  
     0.510
ABD29816.1
Conserved hypothetical protein.
  
     0.452
ABD30587.1
Conserved hypothetical protein.
  
     0.440
ABD31153.1
Conserved hypothetical protein; Belongs to the UPF0421 family.
  
     0.404
Your Current Organism:
Staphylococcus aureus
NCBI taxonomy Id: 93061
Other names: S. aureus subsp. aureus NCTC 8325, Staphylococcus aureus NCTC 8325, Staphylococcus aureus subsp. aureus NCTC 8325, Staphylococcus aureus subsp. aureus str. NCTC 8325, Staphylococcus aureus subsp. aureus strain NCTC 8325
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.