STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001953075_02774Unannotated protein. (329 aa)    
Predicted Functional Partners:
GCA_001953075_03818
Unannotated protein.
  
 0.767
GCA_001953075_02126
Unannotated protein.
    
  0.753
GCA_001953075_02759
Unannotated protein.
    
  0.753
GCA_001953075_02975
Unannotated protein.
  
 0.737
GCA_001953075_03493
Unannotated protein.
  
 0.737
GCA_001953075_00290
Unannotated protein.
    
  0.718
GCA_001953075_00554
Unannotated protein.
   
  0.717
GCA_001953075_03368
Unannotated protein.
  
 
  0.715
GCA_001953075_02464
Unannotated protein.
   
 0.704
GCA_001953075_01510
Unannotated protein.
  
 
 0.699
Your Current Organism:
Halioglobus pacificus
NCBI taxonomy Id: 930806
Other names: H. pacificus, Halioglobus pacificus Park et al. 2012, KCTC 23430, NBRC 107742, gamma proteobacterium S1-72, strain S1-72
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.