STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001953075_04509Unannotated protein. (457 aa)    
Predicted Functional Partners:
GCA_001953075_04513
Unannotated protein.
 
 
 0.966
GCA_001953075_04512
Unannotated protein.
 
  
 0.948
GCA_001953075_04514
Unannotated protein.
 
  
 0.936
GCA_001953075_04511
Unannotated protein.
 
     0.850
GCA_001953075_04510
Unannotated protein.
 
     0.848
GCA_001953075_04515
Unannotated protein.
 
  
 0.681
GCA_001953075_01986
Unannotated protein.
 
 
 0.601
GCA_001953075_04497
Unannotated protein.
 
 
 0.600
GCA_001953075_04148
Unannotated protein.
  
 
 0.554
GCA_001953075_04501
Unannotated protein.
  
 
 0.537
Your Current Organism:
Halioglobus pacificus
NCBI taxonomy Id: 930806
Other names: H. pacificus, Halioglobus pacificus Park et al. 2012, KCTC 23430, NBRC 107742, gamma proteobacterium S1-72, strain S1-72
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.