STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D0BYG9Unplaced genomic scaffold scaffold_2787, whole genome shotgun sequence. (164 aa)    
Predicted Functional Partners:
A0A0D0CWU2
Unplaced genomic scaffold scaffold_6839, whole genome shotgun sequence.
  
     0.525
A0A0D0E4B3
Unplaced genomic scaffold scaffold_189, whole genome shotgun sequence.
  
     0.525
A0A0D0CEF7
Unplaced genomic scaffold scaffold_1048, whole genome shotgun sequence.
  
     0.509
A0A0D0BRX5
Unplaced genomic scaffold scaffold_4227, whole genome shotgun sequence.
  
     0.505
A0A0D0BTP2
Unplaced genomic scaffold scaffold_3721, whole genome shotgun sequence.
  
     0.488
A0A0D0D9U3
Unplaced genomic scaffold scaffold_1156, whole genome shotgun sequence.
  
     0.485
Your Current Organism:
Paxillus rubicundulus
NCBI taxonomy Id: 930991
Other names: P. rubicundulus Ve08.2h10, Paxillus rubicundulus Ve08.2h10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.