STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D0C564Unplaced genomic scaffold scaffold_1816, whole genome shotgun sequence. (405 aa)    
Predicted Functional Partners:
A0A0D0DWF4
Unplaced genomic scaffold scaffold_30, whole genome shotgun sequence.
  
 0.756
A0A0D0DK78
Unplaced genomic scaffold scaffold_857, whole genome shotgun sequence.
    
 0.702
A0A0D0E4G2
Unplaced genomic scaffold scaffold_184, whole genome shotgun sequence.
    
 0.702
A0A0D0DGC1
Unplaced genomic scaffold scaffold_1227, whole genome shotgun sequence.
    
 0.673
A0A0D0C7S9
Unplaced genomic scaffold scaffold_1588, whole genome shotgun sequence.
    
 0.652
A0A0D0EA75
Unplaced genomic scaffold scaffold_21, whole genome shotgun sequence.
  
 
 0.651
A0A0D0E2Y2
Unplaced genomic scaffold scaffold_240, whole genome shotgun sequence.
    
 0.646
A0A0D0EAR2
Glycerol-3-phosphate dehydrogenase [NAD(+)].
  
 
 0.612
A0A0D0E2S4
Unplaced genomic scaffold scaffold_74, whole genome shotgun sequence.
     
 0.608
A0A0D0E179
Unplaced genomic scaffold scaffold_113, whole genome shotgun sequence.
    
 0.603
Your Current Organism:
Paxillus rubicundulus
NCBI taxonomy Id: 930991
Other names: P. rubicundulus Ve08.2h10, Paxillus rubicundulus Ve08.2h10
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