STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D0C5A3Unplaced genomic scaffold scaffold_1806, whole genome shotgun sequence. (397 aa)    
Predicted Functional Partners:
A0A0D0CGN7
Unplaced genomic scaffold scaffold_895, whole genome shotgun sequence; Belongs to the universal ribosomal protein uL11 family.
   
 
 0.840
A0A0D0DJR5
Unplaced genomic scaffold scaffold_895, whole genome shotgun sequence.
   
 
 0.810
A0A0D0DSH8
Unplaced genomic scaffold scaffold_605, whole genome shotgun sequence.
   
    0.786
A0A0D0E8E7
Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily.
   
    0.786
A0A0D0E430
Unplaced genomic scaffold scaffold_49, whole genome shotgun sequence.
   
    0.785
A0A0D0E8N4
Unplaced genomic scaffold scaffold_63, whole genome shotgun sequence; Belongs to the universal ribosomal protein uL11 family.
   
 
 0.783
A0A0D0DYQ9
Unplaced genomic scaffold scaffold_2, whole genome shotgun sequence.
   
    0.774
A0A0D0EAM3
Unplaced genomic scaffold scaffold_11, whole genome shotgun sequence.
   
    0.773
A0A0D0DY90
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.
 
      0.769
A0A0D0E6C0
Unplaced genomic scaffold scaffold_11, whole genome shotgun sequence.
   
  
 0.754
Your Current Organism:
Paxillus rubicundulus
NCBI taxonomy Id: 930991
Other names: P. rubicundulus Ve08.2h10, Paxillus rubicundulus Ve08.2h10
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