STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D0C889Unplaced genomic scaffold scaffold_1538, whole genome shotgun sequence. (215 aa)    
Predicted Functional Partners:
A0A0D0D4I9
Unplaced genomic scaffold scaffold_3663, whole genome shotgun sequence.
     
 0.938
A0A0D0CRY4
Unplaced genomic scaffold scaffold_1872, whole genome shotgun sequence.
     
 0.930
A0A0D0DNZ3
DNA polymerase.
    
 0.930
A0A0D0E8C3
DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family.
    
 0.724
A0A0D0DPW1
DNA polymerase alpha subunit B; Accessory subunit of the DNA polymerase alpha complex (also known as the alpha DNA polymerase-primase complex) which plays an essential role in the initiation of DNA synthesis.
     
 0.702
A0A0D0D9G9
DNA polymerase.
    
 0.700
A0A0D0DQ51
DNA polymerase.
    
 0.700
A0A0D0E8W0
DNA primase large subunit; DNA primase is the polymerase that synthesizes small RNA primers for the Okazaki fragments made during discontinuous DNA replication; Belongs to the eukaryotic-type primase large subunit family.
     
 0.684
A0A0D0CYE4
Unplaced genomic scaffold scaffold_1143, whole genome shotgun sequence.
     
 0.648
A0A0D0E0V7
Unplaced genomic scaffold scaffold_126, whole genome shotgun sequence.
     
 0.648
Your Current Organism:
Paxillus rubicundulus
NCBI taxonomy Id: 930991
Other names: P. rubicundulus Ve08.2h10, Paxillus rubicundulus Ve08.2h10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.