STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D0CC45Unplaced genomic scaffold scaffold_1211, whole genome shotgun sequence. (465 aa)    
Predicted Functional Partners:
A0A0D0ECQ8
Unplaced genomic scaffold scaffold_27, whole genome shotgun sequence; Belongs to the universal ribosomal protein uS19 family.
   
 0.945
A0A0D0E9P5
Unplaced genomic scaffold scaffold_191, whole genome shotgun sequence.
   
 0.944
A0A0D0DT75
40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.
   
 0.943
RPS1
40S ribosomal protein S1; Belongs to the eukaryotic ribosomal protein eS1 family.
   
 0.943
A0A0D0DWL5
Unplaced genomic scaffold scaffold_27, whole genome shotgun sequence; Belongs to the universal ribosomal protein uS3 family.
   
 0.942
A0A0D0EA12
Unplaced genomic scaffold scaffold_173, whole genome shotgun sequence; Belongs to the universal ribosomal protein uS17 family.
   
 0.942
A0A0D0D981
Unplaced genomic scaffold scaffold_742, whole genome shotgun sequence.
   
 0.941
A0A0D0DB58
40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.
   
 0.941
A0A0D0EBM5
Unplaced genomic scaffold scaffold_94, whole genome shotgun sequence.
   
 0.941
A0A0D0EBW8
40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.
   
 0.941
Your Current Organism:
Paxillus rubicundulus
NCBI taxonomy Id: 930991
Other names: P. rubicundulus Ve08.2h10, Paxillus rubicundulus Ve08.2h10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.