STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D0CF67ATP-dependent DNA helicase; Belongs to the helicase family. (136 aa)    
Predicted Functional Partners:
A0A0D0E4N0
Unplaced genomic scaffold scaffold_477, whole genome shotgun sequence.
   
 
 0.726
A0A0D0CCW5
Unplaced genomic scaffold scaffold_1159, whole genome shotgun sequence.
   
 
 0.611
A0A0D0D7X7
Unplaced genomic scaffold scaffold_401, whole genome shotgun sequence.
   
 
 0.611
A0A0D0DJC3
Unplaced genomic scaffold scaffold_70, whole genome shotgun sequence.
   
 
 0.611
A0A0D0C721
Unplaced genomic scaffold scaffold_1636, whole genome shotgun sequence.
   
 
 0.604
A0A0D0CP32
Unplaced genomic scaffold scaffold_2353, whole genome shotgun sequence.
   
 
 0.604
A0A0D0E278
Serine/threonine-protein kinase.
   
 
 0.602
A0A0D0DT25
Unplaced genomic scaffold scaffold_143, whole genome shotgun sequence.
   
 
  0.583
A0A0D0DYW2
Unplaced genomic scaffold scaffold_218, whole genome shotgun sequence.
     
 0.551
A0A0D0DVH8
Unplaced genomic scaffold scaffold_357, whole genome shotgun sequence.
   
  
 0.451
Your Current Organism:
Paxillus rubicundulus
NCBI taxonomy Id: 930991
Other names: P. rubicundulus Ve08.2h10, Paxillus rubicundulus Ve08.2h10
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