STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D0CGP9Unplaced genomic scaffold scaffold_893, whole genome shotgun sequence. (317 aa)    
Predicted Functional Partners:
A0A0D0EAE5
Ribosomal RNA-processing protein 8; S-adenosyl-L-methionine-dependent methyltransferase that specifically methylates the N(1) position of adenine in helix 25.1 in 25S rRNA. Required both for ribosomal 40S and 60S subunits biogenesis. Required for efficient pre-rRNA cleavage at site A2. Belongs to the methyltransferase superfamily. RRP8 family.
   
  
 0.731
A0A0D0CBX0
Alpha-1,3-glucosyltransferase; Belongs to the ALG6/ALG8 glucosyltransferase family.
   
 
  0.605
A0A0D0DYG5
Unplaced genomic scaffold scaffold_4, whole genome shotgun sequence.
   
 
  0.605
A0A0D0DW09
Unplaced genomic scaffold scaffold_42, whole genome shotgun sequence; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
   
 
 0.580
A0A0D0C7V1
Unplaced genomic scaffold scaffold_1581, whole genome shotgun sequence.
   
    0.578
A0A0D0DSH8
Unplaced genomic scaffold scaffold_605, whole genome shotgun sequence.
   
    0.578
A0A0D0DYQ9
Unplaced genomic scaffold scaffold_2, whole genome shotgun sequence.
   
  
 0.550
A0A0D0DX63
Multifunctional tryptophan biosynthesis protein; Trifunctional enzyme bearing the Gln amidotransferase (GATase) domain of anthranilate synthase, indole-glycerolphosphate synthase, and phosphoribosylanthranilate isomerase activities.
      
 0.522
A0A0D0DSC3
Unplaced genomic scaffold scaffold_170, whole genome shotgun sequence.
   
   0.518
A0A0D0D5H2
Unplaced genomic scaffold scaffold_514, whole genome shotgun sequence.
   
  
 0.510
Your Current Organism:
Paxillus rubicundulus
NCBI taxonomy Id: 930991
Other names: P. rubicundulus Ve08.2h10, Paxillus rubicundulus Ve08.2h10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.