STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D0CLH4Unplaced genomic scaffold scaffold_767, whole genome shotgun sequence. (458 aa)    
Predicted Functional Partners:
A0A0D0DJS4
Unplaced genomic scaffold scaffold_893, whole genome shotgun sequence.
   
 0.986
A0A0D0DZP9
Unplaced genomic scaffold scaffold_180, whole genome shotgun sequence.
   
 0.977
A0A0D0DR55
Unplaced genomic scaffold scaffold_227, whole genome shotgun sequence.
   
 0.969
A0A0D0DLF1
Unplaced genomic scaffold scaffold_490, whole genome shotgun sequence.
    
 0.967
A0A0D0DY05
Unplaced genomic scaffold scaffold_246, whole genome shotgun sequence.
    
 0.967
A0A0D0E8L6
Unplaced genomic scaffold scaffold_246, whole genome shotgun sequence.
    
 0.967
A0A0D0EB59
ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.
   
 0.939
A0A0D0DJF6
Unplaced genomic scaffold scaffold_67, whole genome shotgun sequence.
    
 0.905
A0A0D0CMQ5
Histone H3; Belongs to the histone H3 family.
    
 0.898
A0A0D0DMB2
Unplaced genomic scaffold scaffold_428, whole genome shotgun sequence.
    
 0.898
Your Current Organism:
Paxillus rubicundulus
NCBI taxonomy Id: 930991
Other names: P. rubicundulus Ve08.2h10, Paxillus rubicundulus Ve08.2h10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.