STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D0CP27Unplaced genomic scaffold scaffold_5870, whole genome shotgun sequence. (119 aa)    
Predicted Functional Partners:
A0A0D0CEM2
Unplaced genomic scaffold scaffold_1026, whole genome shotgun sequence.
    
 0.818
A0A0D0CX58
Unplaced genomic scaffold scaffold_1267, whole genome shotgun sequence.
    
 0.818
A0A0D0DFT3
Unplaced genomic scaffold scaffold_1321, whole genome shotgun sequence.
    
 0.818
A0A0D0DY58
Unplaced genomic scaffold scaffold_7, whole genome shotgun sequence.
    
 0.818
A0A0D0E1J5
Anaphase-promoting complex subunit 10; Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin-protein ligase complex that controls progression through mitosis and the G1 phase of the cell cycle.
    
 0.715
A0A0D0CCW5
Unplaced genomic scaffold scaffold_1159, whole genome shotgun sequence.
    
 0.710
A0A0D0D5N1
Unplaced genomic scaffold scaffold_505, whole genome shotgun sequence.
    
 0.710
A0A0D0D7X7
Unplaced genomic scaffold scaffold_401, whole genome shotgun sequence.
    
 0.710
A0A0D0DBT4
Unplaced genomic scaffold scaffold_953, whole genome shotgun sequence.
    
 0.710
A0A0D0DE58
Unplaced genomic scaffold scaffold_203, whole genome shotgun sequence.
    
 0.710
Your Current Organism:
Paxillus rubicundulus
NCBI taxonomy Id: 930991
Other names: P. rubicundulus Ve08.2h10, Paxillus rubicundulus Ve08.2h10
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