STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D0CVS5Unplaced genomic scaffold scaffold_1424, whole genome shotgun sequence. (361 aa)    
Predicted Functional Partners:
A0A0D0DUY6
Unplaced genomic scaffold scaffold_391, whole genome shotgun sequence.
   
 0.831
A0A0D0E4L2
Unplaced genomic scaffold scaffold_178, whole genome shotgun sequence; Belongs to the calmodulin family.
   
 0.831
A0A0D0DUA5
Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.
    
 
 0.699
A0A0D0E8V9
Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family.
    
 
 0.699
A0A0D0EDB5
Unplaced genomic scaffold scaffold_4, whole genome shotgun sequence.
   
 0.695
A0A0D0DMQ6
Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.
    
 
 0.692
A0A0D0DPV5
Unplaced genomic scaffold scaffold_307, whole genome shotgun sequence.
   
 0.692
A0A0D0E5Q1
Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.
    
 
 0.692
A0A0D0DB99
Unplaced genomic scaffold scaffold_287, whole genome shotgun sequence.
   
 0.689
A0A0D0E4H1
Unplaced genomic scaffold scaffold_43, whole genome shotgun sequence.
   
 0.680
Your Current Organism:
Paxillus rubicundulus
NCBI taxonomy Id: 930991
Other names: P. rubicundulus Ve08.2h10, Paxillus rubicundulus Ve08.2h10
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