STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D0CX23Unplaced genomic scaffold scaffold_1277, whole genome shotgun sequence. (391 aa)    
Predicted Functional Partners:
A0A0D0DWF4
Unplaced genomic scaffold scaffold_30, whole genome shotgun sequence.
    
 0.988
A0A0D0CCW5
Unplaced genomic scaffold scaffold_1159, whole genome shotgun sequence.
   
 0.931
A0A0D0D7X7
Unplaced genomic scaffold scaffold_401, whole genome shotgun sequence.
   
 0.931
A0A0D0DJC3
Unplaced genomic scaffold scaffold_70, whole genome shotgun sequence.
   
 0.931
A0A0D0E1A5
Cyclin-dependent kinases regulatory subunit; Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function.
   
 0.921
A0A0D0D335
Unplaced genomic scaffold scaffold_806, whole genome shotgun sequence; Belongs to the cyclin family.
   
 0.910
A0A0D0D6E7
Unplaced genomic scaffold scaffold_757, whole genome shotgun sequence; Belongs to the cyclin family.
   
 0.910
A0A0D0D9A3
Unplaced genomic scaffold scaffold_4630, whole genome shotgun sequence; Belongs to the cyclin family.
   
 0.910
A0A0D0DUG6
Unplaced genomic scaffold scaffold_429, whole genome shotgun sequence; Belongs to the cyclin family.
   
 0.910
A0A0D0DWZ1
Unplaced genomic scaffold scaffold_653, whole genome shotgun sequence; Belongs to the cyclin family.
   
 0.910
Your Current Organism:
Paxillus rubicundulus
NCBI taxonomy Id: 930991
Other names: P. rubicundulus Ve08.2h10, Paxillus rubicundulus Ve08.2h10
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