STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D0D056Unplaced genomic scaffold scaffold_2423, whole genome shotgun sequence. (66 aa)    
Predicted Functional Partners:
A0A0D0D8V6
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
 
 0.678
A0A0D0DID2
Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism.
   
 
 0.588
A0A0D0E288
Unplaced genomic scaffold scaffold_85, whole genome shotgun sequence.
   
 
 0.588
A0A0D0DW10
Unplaced genomic scaffold scaffold_324, whole genome shotgun sequence.
    
 
 0.587
A0A0D0DSB2
Unplaced genomic scaffold scaffold_172, whole genome shotgun sequence.
    
 
 0.505
A0A0D0DVD4
Unplaced genomic scaffold scaffold_364, whole genome shotgun sequence.
    
 
 0.503
A0A0D0DU75
Unplaced genomic scaffold scaffold_99, whole genome shotgun sequence.
   
 
 0.494
A0A0D0DD48
Unplaced genomic scaffold scaffold_236, whole genome shotgun sequence.
   
 
 0.459
A0A0D0E9U9
Unplaced genomic scaffold scaffold_183, whole genome shotgun sequence.
    
 
 0.441
A0A0D0DZX2
Unplaced genomic scaffold scaffold_170, whole genome shotgun sequence.
   
   0.424
Your Current Organism:
Paxillus rubicundulus
NCBI taxonomy Id: 930991
Other names: P. rubicundulus Ve08.2h10, Paxillus rubicundulus Ve08.2h10
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