STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D0D3N1Unplaced genomic scaffold scaffold_1867, whole genome shotgun sequence. (358 aa)    
Predicted Functional Partners:
A0A0D0E9S9
Unplaced genomic scaffold scaffold_30, whole genome shotgun sequence.
  
 0.996
A0A0D0D9B3
Unplaced genomic scaffold scaffold_349, whole genome shotgun sequence.
  
 0.994
A0A0D0CRY9
Cytochrome c oxidase subunit 2; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. Subunit 2 transfers the electrons from cytochrome c via its binuclear copper A center to the bimetallic center of the catalytic subunit 1.
  
 
 0.980
A0A0D0EC64
Cytochrome c heme lyase; Links covalently the heme group to the apoprotein of cytochrome c.
   
 
 0.949
A0A0D0DQF2
Unplaced genomic scaffold scaffold_274, whole genome shotgun sequence.
     
 0.944
A0A0D0DSW0
Cytochrome c heme lyase; Links covalently the heme group to the apoprotein of cytochrome c.
   
 
 0.944
A0A0D0EBV2
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.
   
 
 0.942
A0A0D0CE95
Unplaced genomic scaffold scaffold_1069, whole genome shotgun sequence.
    
 0.941
A0A0D0CQX2
Unplaced genomic scaffold scaffold_2015, whole genome shotgun sequence.
   
 
 0.930
A0A0D0D7B0
Unplaced genomic scaffold scaffold_1423, whole genome shotgun sequence.
   
 
 0.907
Your Current Organism:
Paxillus rubicundulus
NCBI taxonomy Id: 930991
Other names: P. rubicundulus Ve08.2h10, Paxillus rubicundulus Ve08.2h10
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