A0A0D0D4M0 protein (Paxillus rubicundulus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A0D0D4M0

Unplaced genomic scaffold scaffold_1728, whole genome shotgun sequence. (108 aa)

Predicted Functional Partners:

A0A0D0E6Z0

0.552

A0A0D0CDP6

0.526

A0A0D0CYN9

0.518

A0A0D0CY97

0.510

A0A0D0DGI1

0.507

A0A0D0DRR1

0.505

A0A0D0E128

0.486

A0A0D0CJD3

0.438

A0A0D0DB85

0.405

Your Current Organism:

Paxillus rubicundulus

NCBI taxonomy Id: 930991
Other names: P. rubicundulus Ve08.2h10, Paxillus rubicundulus Ve08.2h10

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structured XML interaction data, according to the 'PSI-MI' data standard

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A0D0CDP6	A0A0D0CJD3	Unplaced genomic scaffold scaffold_4684, whole genome shotgun sequence.	Unplaced genomic scaffold scaffold_3379, whole genome shotgun sequence.	0.424
A0A0D0CDP6	A0A0D0CY97	Unplaced genomic scaffold scaffold_4684, whole genome shotgun sequence.	Unplaced genomic scaffold scaffold_2797, whole genome shotgun sequence.	0.517
A0A0D0CDP6	A0A0D0CYN9	Unplaced genomic scaffold scaffold_4684, whole genome shotgun sequence.	Unplaced genomic scaffold scaffold_5850, whole genome shotgun sequence.	0.519
A0A0D0CDP6	A0A0D0D4M0	Unplaced genomic scaffold scaffold_4684, whole genome shotgun sequence.	Unplaced genomic scaffold scaffold_1728, whole genome shotgun sequence.	0.526
A0A0D0CDP6	A0A0D0DB85	Unplaced genomic scaffold scaffold_4684, whole genome shotgun sequence.	Unplaced genomic scaffold scaffold_4016, whole genome shotgun sequence.	0.407
A0A0D0CDP6	A0A0D0E128	Unplaced genomic scaffold scaffold_4684, whole genome shotgun sequence.	Unplaced genomic scaffold scaffold_119, whole genome shotgun sequence.	0.498
A0A0D0CDP6	A0A0D0E6Z0	Unplaced genomic scaffold scaffold_4684, whole genome shotgun sequence.	Unplaced genomic scaffold scaffold_2, whole genome shotgun sequence; Belongs to the ubiquitin-conjugating enzyme family.	0.552
A0A0D0CJD3	A0A0D0CDP6	Unplaced genomic scaffold scaffold_3379, whole genome shotgun sequence.	Unplaced genomic scaffold scaffold_4684, whole genome shotgun sequence.	0.424
A0A0D0CJD3	A0A0D0D4M0	Unplaced genomic scaffold scaffold_3379, whole genome shotgun sequence.	Unplaced genomic scaffold scaffold_1728, whole genome shotgun sequence.	0.438
A0A0D0CJD3	A0A0D0DGI1	Unplaced genomic scaffold scaffold_3379, whole genome shotgun sequence.	Unplaced genomic scaffold scaffold_2368, whole genome shotgun sequence.	0.498
A0A0D0CJD3	A0A0D0E6Z0	Unplaced genomic scaffold scaffold_3379, whole genome shotgun sequence.	Unplaced genomic scaffold scaffold_2, whole genome shotgun sequence; Belongs to the ubiquitin-conjugating enzyme family.	0.440
A0A0D0CY97	A0A0D0CDP6	Unplaced genomic scaffold scaffold_2797, whole genome shotgun sequence.	Unplaced genomic scaffold scaffold_4684, whole genome shotgun sequence.	0.517
A0A0D0CY97	A0A0D0D4M0	Unplaced genomic scaffold scaffold_2797, whole genome shotgun sequence.	Unplaced genomic scaffold scaffold_1728, whole genome shotgun sequence.	0.510
A0A0D0CY97	A0A0D0E6Z0	Unplaced genomic scaffold scaffold_2797, whole genome shotgun sequence.	Unplaced genomic scaffold scaffold_2, whole genome shotgun sequence; Belongs to the ubiquitin-conjugating enzyme family.	0.728
A0A0D0CYN9	A0A0D0CDP6	Unplaced genomic scaffold scaffold_5850, whole genome shotgun sequence.	Unplaced genomic scaffold scaffold_4684, whole genome shotgun sequence.	0.519
A0A0D0CYN9	A0A0D0D4M0	Unplaced genomic scaffold scaffold_5850, whole genome shotgun sequence.	Unplaced genomic scaffold scaffold_1728, whole genome shotgun sequence.	0.518
A0A0D0CYN9	A0A0D0E6Z0	Unplaced genomic scaffold scaffold_5850, whole genome shotgun sequence.	Unplaced genomic scaffold scaffold_2, whole genome shotgun sequence; Belongs to the ubiquitin-conjugating enzyme family.	0.552
A0A0D0D4M0	A0A0D0CDP6	Unplaced genomic scaffold scaffold_1728, whole genome shotgun sequence.	Unplaced genomic scaffold scaffold_4684, whole genome shotgun sequence.	0.526
A0A0D0D4M0	A0A0D0CJD3	Unplaced genomic scaffold scaffold_1728, whole genome shotgun sequence.	Unplaced genomic scaffold scaffold_3379, whole genome shotgun sequence.	0.438
A0A0D0D4M0	A0A0D0CY97	Unplaced genomic scaffold scaffold_1728, whole genome shotgun sequence.	Unplaced genomic scaffold scaffold_2797, whole genome shotgun sequence.	0.510