STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D0D6A8Unplaced genomic scaffold scaffold_3132, whole genome shotgun sequence. (457 aa)    
Predicted Functional Partners:
A0A0D0DTU1
Unplaced genomic scaffold scaffold_487, whole genome shotgun sequence.
    
 0.892
A0A0D0E662
Unplaced genomic scaffold scaffold_13, whole genome shotgun sequence; Belongs to the actin family.
    
 0.892
A0A0D0E994
Unplaced genomic scaffold scaffold_212, whole genome shotgun sequence.
    
 0.892
A0A0D0E5Z2
Unplaced genomic scaffold scaffold_404, whole genome shotgun sequence.
    
 0.884
A0A0D0DLC7
Unplaced genomic scaffold scaffold_495, whole genome shotgun sequence.
    
 0.881
A0A0D0DQK5
Unplaced genomic scaffold scaffold_929, whole genome shotgun sequence.
    
 0.881
A0A0D0E7M2
Unplaced genomic scaffold scaffold_305, whole genome shotgun sequence.
    
 0.881
A0A0D0DE30
Unplaced genomic scaffold scaffold_205, whole genome shotgun sequence.
    
 0.876
A0A0D0DRJ5
Unplaced genomic scaffold scaffold_205, whole genome shotgun sequence.
    
 0.876
A0A0D0CPL3
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 0.829
Your Current Organism:
Paxillus rubicundulus
NCBI taxonomy Id: 930991
Other names: P. rubicundulus Ve08.2h10, Paxillus rubicundulus Ve08.2h10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.