A0A0D0D6G5 protein (Paxillus rubicundulus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A0D0D6G5

Unplaced genomic scaffold scaffold_462, whole genome shotgun sequence. (476 aa)

Predicted Functional Partners:

A0A0D0CYI8

0.999

A0A0D0DKZ6

0.999

A0A0D0DXM5

0.999

A0A0D0DYT5

0.999

A0A0D0E272

0.999

A0A0D0EAE1

0.999

A0A0D0E0L5

0.963

A0A0D0E003

0.962

A0A0D0CG00

0.945

A0A0D0CJZ2

0.945

Your Current Organism:

Paxillus rubicundulus

NCBI taxonomy Id: 930991
Other names: P. rubicundulus Ve08.2h10, Paxillus rubicundulus Ve08.2h10

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A0D0CG00	A0A0D0D6G5	Unplaced genomic scaffold scaffold_928, whole genome shotgun sequence.	Unplaced genomic scaffold scaffold_462, whole genome shotgun sequence.	0.945
A0A0D0CG00	A0A0D0DKZ6	Unplaced genomic scaffold scaffold_928, whole genome shotgun sequence.	Unplaced genomic scaffold scaffold_44, whole genome shotgun sequence.	0.936
A0A0D0CG00	A0A0D0DXM5	Unplaced genomic scaffold scaffold_928, whole genome shotgun sequence.	Unplaced genomic scaffold scaffold_598, whole genome shotgun sequence.	0.942
A0A0D0CG00	A0A0D0DYT5	Unplaced genomic scaffold scaffold_928, whole genome shotgun sequence.	Unplaced genomic scaffold scaffold_1, whole genome shotgun sequence.	0.953
A0A0D0CG00	A0A0D0E003	Unplaced genomic scaffold scaffold_928, whole genome shotgun sequence.	Unplaced genomic scaffold scaffold_410, whole genome shotgun sequence.	0.919
A0A0D0CG00	A0A0D0E0L5	Unplaced genomic scaffold scaffold_928, whole genome shotgun sequence.	Unplaced genomic scaffold scaffold_707, whole genome shotgun sequence.	0.932
A0A0D0CG00	A0A0D0E272	Unplaced genomic scaffold scaffold_928, whole genome shotgun sequence.	Unplaced genomic scaffold scaffold_87, whole genome shotgun sequence.	0.953
A0A0D0CG00	A0A0D0EAE1	Unplaced genomic scaffold scaffold_928, whole genome shotgun sequence.	Unplaced genomic scaffold scaffold_160, whole genome shotgun sequence.	0.950
A0A0D0CJZ2	A0A0D0D6G5	Unplaced genomic scaffold scaffold_3260, whole genome shotgun sequence.	Unplaced genomic scaffold scaffold_462, whole genome shotgun sequence.	0.945
A0A0D0CJZ2	A0A0D0DKZ6	Unplaced genomic scaffold scaffold_3260, whole genome shotgun sequence.	Unplaced genomic scaffold scaffold_44, whole genome shotgun sequence.	0.936
A0A0D0CJZ2	A0A0D0DXM5	Unplaced genomic scaffold scaffold_3260, whole genome shotgun sequence.	Unplaced genomic scaffold scaffold_598, whole genome shotgun sequence.	0.942
A0A0D0CJZ2	A0A0D0DYT5	Unplaced genomic scaffold scaffold_3260, whole genome shotgun sequence.	Unplaced genomic scaffold scaffold_1, whole genome shotgun sequence.	0.953
A0A0D0CJZ2	A0A0D0E003	Unplaced genomic scaffold scaffold_3260, whole genome shotgun sequence.	Unplaced genomic scaffold scaffold_410, whole genome shotgun sequence.	0.919
A0A0D0CJZ2	A0A0D0E0L5	Unplaced genomic scaffold scaffold_3260, whole genome shotgun sequence.	Unplaced genomic scaffold scaffold_707, whole genome shotgun sequence.	0.932
A0A0D0CJZ2	A0A0D0E272	Unplaced genomic scaffold scaffold_3260, whole genome shotgun sequence.	Unplaced genomic scaffold scaffold_87, whole genome shotgun sequence.	0.953
A0A0D0CJZ2	A0A0D0EAE1	Unplaced genomic scaffold scaffold_3260, whole genome shotgun sequence.	Unplaced genomic scaffold scaffold_160, whole genome shotgun sequence.	0.950
A0A0D0CYI8	A0A0D0D6G5	Unplaced genomic scaffold scaffold_5949, whole genome shotgun sequence.	Unplaced genomic scaffold scaffold_462, whole genome shotgun sequence.	0.999
A0A0D0CYI8	A0A0D0DKZ6	Unplaced genomic scaffold scaffold_5949, whole genome shotgun sequence.	Unplaced genomic scaffold scaffold_44, whole genome shotgun sequence.	0.986
A0A0D0CYI8	A0A0D0DXM5	Unplaced genomic scaffold scaffold_5949, whole genome shotgun sequence.	Unplaced genomic scaffold scaffold_598, whole genome shotgun sequence.	0.999
A0A0D0CYI8	A0A0D0DYT5	Unplaced genomic scaffold scaffold_5949, whole genome shotgun sequence.	Unplaced genomic scaffold scaffold_1, whole genome shotgun sequence.	0.999