STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D0D6V7Unplaced genomic scaffold scaffold_441, whole genome shotgun sequence. (123 aa)    
Predicted Functional Partners:
A0A0D0DP14
Unplaced genomic scaffold scaffold_5, whole genome shotgun sequence.
   
 0.902
A0A0D0DVP6
Unplaced genomic scaffold scaffold_346, whole genome shotgun sequence.
   
 0.896
NOP7
Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 0.890
A0A0D0DAB0
Unplaced genomic scaffold scaffold_311, whole genome shotgun sequence.
   
 0.848
A0A0D0DUY6
Unplaced genomic scaffold scaffold_391, whole genome shotgun sequence.
    
 0.845
A0A0D0E4L2
Unplaced genomic scaffold scaffold_178, whole genome shotgun sequence; Belongs to the calmodulin family.
    
 0.845
A0A0D0E6C0
Unplaced genomic scaffold scaffold_11, whole genome shotgun sequence.
   
  0.830
A0A0D0ED96
Unplaced genomic scaffold scaffold_5, whole genome shotgun sequence.
    
 0.816
A0A0D0ECT4
Unplaced genomic scaffold scaffold_24, whole genome shotgun sequence.
    
 0.795
A0A0D0DRG3
Unplaced genomic scaffold scaffold_211, whole genome shotgun sequence.
    
  0.788
Your Current Organism:
Paxillus rubicundulus
NCBI taxonomy Id: 930991
Other names: P. rubicundulus Ve08.2h10, Paxillus rubicundulus Ve08.2h10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.