STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D0D9J0Unplaced genomic scaffold scaffold_339, whole genome shotgun sequence. (400 aa)    
Predicted Functional Partners:
A0A0D0DWP4
Unplaced genomic scaffold scaffold_680, whole genome shotgun sequence; Belongs to the SKP1 family.
    
 
 0.753
A0A0D0DB51
Unplaced genomic scaffold scaffold_291, whole genome shotgun sequence.
   
 0.751
A0A0D0E3P0
Unplaced genomic scaffold scaffold_56, whole genome shotgun sequence.
   
 0.751
A0A0D0DL18
Unplaced genomic scaffold scaffold_43, whole genome shotgun sequence.
    
   0.746
A0A0D0DY49
DNA polymerase epsilon subunit; Participates in DNA repair and in chromosomal DNA replication; Belongs to the DNA polymerase epsilon subunit B family.
    
   0.744
A0A0D0ED69
Unplaced genomic scaffold scaffold_8, whole genome shotgun sequence.
    
   0.744
MDM34
Mitochondrial distribution and morphology protein 34; Component of the ERMES/MDM complex, which serves as a molecular tether to connect the endoplasmic reticulum (ER) and mitochondria. Components of this complex are involved in the control of mitochondrial shape and protein biogenesis, and function in nonvesicular lipid trafficking between the ER and mitochondria. MDM34 is required for the interaction of the ER-resident membrane protein MMM1 and the outer mitochondrial membrane-resident beta-barrel protein MDM10.
    
 
 0.741
A0A0D0E9B5
Unplaced genomic scaffold scaffold_209, whole genome shotgun sequence; Belongs to the protein kinase superfamily.
    
 
 0.741
A0A0D0ECG3
Unplaced genomic scaffold scaffold_41, whole genome shotgun sequence; Belongs to the protein kinase superfamily.
    
 
 0.741
A0A0D0ECQ4
Unplaced genomic scaffold scaffold_28, whole genome shotgun sequence.
    
   0.739
Your Current Organism:
Paxillus rubicundulus
NCBI taxonomy Id: 930991
Other names: P. rubicundulus Ve08.2h10, Paxillus rubicundulus Ve08.2h10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.