STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D0DA24Unplaced genomic scaffold scaffold_1127, whole genome shotgun sequence. (288 aa)    
Predicted Functional Partners:
A0A0D0D9T5
Unplaced genomic scaffold scaffold_4500, whole genome shotgun sequence.
 
     0.459
A0A0D0CHN1
Unplaced genomic scaffold scaffold_3796, whole genome shotgun sequence.
  
     0.454
A0A0D0D2K8
Unplaced genomic scaffold scaffold_4296, whole genome shotgun sequence.
 
     0.447
A0A0D0DU98
Unplaced genomic scaffold scaffold_452, whole genome shotgun sequence.
  
     0.446
A0A0D0DEK3
Unplaced genomic scaffold scaffold_1478, whole genome shotgun sequence.
  
     0.418
A0A0D0CP10
Unplaced genomic scaffold scaffold_5899, whole genome shotgun sequence.
  
     0.410
Your Current Organism:
Paxillus rubicundulus
NCBI taxonomy Id: 930991
Other names: P. rubicundulus Ve08.2h10, Paxillus rubicundulus Ve08.2h10
Server load: low (30%) [HD]