STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D0DB61Unplaced genomic scaffold scaffold_291, whole genome shotgun sequence. (477 aa)    
Predicted Functional Partners:
A0A0D0DQ58
Unplaced genomic scaffold scaffold_291, whole genome shotgun sequence.
 
      0.899
A0A0D0DR55
Unplaced genomic scaffold scaffold_227, whole genome shotgun sequence.
    
  0.642
A0A0D0DZJ1
Unplaced genomic scaffold scaffold_189, whole genome shotgun sequence.
    
 0.637
A0A0D0ECT8
Unplaced genomic scaffold scaffold_24, whole genome shotgun sequence.
    
 0.637
A0A0D0DPL0
Unplaced genomic scaffold scaffold_1, whole genome shotgun sequence.
   
   0.620
A0A0D0CTP5
Unplaced genomic scaffold scaffold_1650, whole genome shotgun sequence.
   
 
  0.595
A0A0D0E535
Unplaced genomic scaffold scaffold_450, whole genome shotgun sequence.
   
 
  0.595
A0A0D0E1E7
Bis(5'-adenosyl)-triphosphatase.
   
 
  0.582
A0A0D0CE93
Unplaced genomic scaffold scaffold_1069, whole genome shotgun sequence.
    
 
 0.560
A0A0D0D1C5
U3 small nucleolar RNA-associated protein 22.
   
 
  0.548
Your Current Organism:
Paxillus rubicundulus
NCBI taxonomy Id: 930991
Other names: P. rubicundulus Ve08.2h10, Paxillus rubicundulus Ve08.2h10
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