STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D0DB65Unplaced genomic scaffold scaffold_290, whole genome shotgun sequence. (148 aa)    
Predicted Functional Partners:
A0A0D0E4L0
Unplaced genomic scaffold scaffold_41, whole genome shotgun sequence.
   
 0.999
A0A0D0EDD9
Unplaced genomic scaffold scaffold_2, whole genome shotgun sequence.
   
 0.992
A0A0D0E0R5
Unplaced genomic scaffold scaffold_131, whole genome shotgun sequence.
   
 0.975
A0A0D0E2E6
Unplaced genomic scaffold scaffold_81, whole genome shotgun sequence.
   
 0.975
A0A0D0E453
Unplaced genomic scaffold scaffold_48, whole genome shotgun sequence.
   
 0.971
A0A0D0DPJ9
Unplaced genomic scaffold scaffold_1, whole genome shotgun sequence.
   
 0.954
A0A0D0E8C3
DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family.
   
 0.952
A0A0D0DCV1
Unplaced genomic scaffold scaffold_861, whole genome shotgun sequence.
   
 0.932
A0A0D0D9G9
DNA polymerase.
   
 0.917
A0A0D0DNZ3
DNA polymerase.
   
 0.903
Your Current Organism:
Paxillus rubicundulus
NCBI taxonomy Id: 930991
Other names: P. rubicundulus Ve08.2h10, Paxillus rubicundulus Ve08.2h10
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