STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D0DBC0Unplaced genomic scaffold scaffold_988, whole genome shotgun sequence. (1316 aa)    
Predicted Functional Partners:
A0A0D0E3Z3
Unplaced genomic scaffold scaffold_52, whole genome shotgun sequence; Belongs to the protein kinase superfamily.
    
 
 0.949
A0A0D0DV16
Unplaced genomic scaffold scaffold_385, whole genome shotgun sequence.
    
 
 0.939
A0A0D0DUW6
Unplaced genomic scaffold scaffold_397, whole genome shotgun sequence.
   
 0.925
A0A0D0ECH2
Unplaced genomic scaffold scaffold_40, whole genome shotgun sequence.
    
 0.910
A0A0D0DWV8
Unplaced genomic scaffold scaffold_661, whole genome shotgun sequence.
    
 0.907
A0A0D0E2A9
Unplaced genomic scaffold scaffold_631, whole genome shotgun sequence.
    
 0.907
A0A0D0EBB0
Unplaced genomic scaffold scaffold_120, whole genome shotgun sequence.
    
 0.875
A0A0D0DXJ0
Unplaced genomic scaffold scaffold_15, whole genome shotgun sequence.
    
 
 0.819
A0A0D0DJF9
Unplaced genomic scaffold scaffold_67, whole genome shotgun sequence.
    
 
 0.813
A0A0D0DRG5
Unplaced genomic scaffold scaffold_211, whole genome shotgun sequence.
    
 0.803
Your Current Organism:
Paxillus rubicundulus
NCBI taxonomy Id: 930991
Other names: P. rubicundulus Ve08.2h10, Paxillus rubicundulus Ve08.2h10
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