STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D0DBH0Unplaced genomic scaffold scaffold_1950, whole genome shotgun sequence. (491 aa)    
Predicted Functional Partners:
A0A0D0E2P8
Glycine cleavage system H protein; The H protein shuttles the methylamine group of glycine from the P protein to the T protein; Belongs to the GcvH family.
  
 0.984
A0A0D0DSG9
Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine.
  
 0.947
A0A0D0D5S3
Unplaced genomic scaffold scaffold_498, whole genome shotgun sequence.
  
 0.895
A0A0D0D715
Unplaced genomic scaffold scaffold_429, whole genome shotgun sequence.
  
 0.895
A0A0D0DK83
Unplaced genomic scaffold scaffold_55, whole genome shotgun sequence.
  
 0.895
A0A0D0DY26
Unplaced genomic scaffold scaffold_243, whole genome shotgun sequence.
  
 0.895
A0A0D0E7L4
Unplaced genomic scaffold scaffold_306, whole genome shotgun sequence.
  
 0.895
A0A0D0E8Z1
Unplaced genomic scaffold scaffold_225, whole genome shotgun sequence.
  
 0.895
A0A0D0DDU6
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
  
 0.874
A0A0D0E725
Unplaced genomic scaffold scaffold_343, whole genome shotgun sequence.
   
 0.856
Your Current Organism:
Paxillus rubicundulus
NCBI taxonomy Id: 930991
Other names: P. rubicundulus Ve08.2h10, Paxillus rubicundulus Ve08.2h10
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