STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D0DBI0Unplaced genomic scaffold scaffold_279, whole genome shotgun sequence. (664 aa)    
Predicted Functional Partners:
A0A0D0EB28
Unplaced genomic scaffold scaffold_132, whole genome shotgun sequence.
    
 
 0.810
A0A0D0DQF2
Unplaced genomic scaffold scaffold_274, whole genome shotgun sequence.
    
 
 0.809
A0A0D0DGR7
Unplaced genomic scaffold scaffold_1187, whole genome shotgun sequence.
   
 
 0.774
A0A0D0DTD6
Unplaced genomic scaffold scaffold_131, whole genome shotgun sequence.
    
  0.768
COQ5
2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial; Methyltransferase required for the conversion of 2- polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2-polyprenyl-3-methyl- 6-methoxy-1,4-benzoquinol (DMQH2).
    
 
 0.759
A0A0D0DYT6
Unplaced genomic scaffold scaffold_514, whole genome shotgun sequence.
    
 
 0.754
A0A0D0E3W4
Tyrosine--tRNA ligase.
    
 
 0.753
A0A0D0CCH0
Unplaced genomic scaffold scaffold_1192, whole genome shotgun sequence.
    
 
 0.751
A0A0D0DWF4
Unplaced genomic scaffold scaffold_30, whole genome shotgun sequence.
    
 
 0.750
A0A0D0DM85
Unplaced genomic scaffold scaffold_27, whole genome shotgun sequence.
    
 
 0.749
Your Current Organism:
Paxillus rubicundulus
NCBI taxonomy Id: 930991
Other names: P. rubicundulus Ve08.2h10, Paxillus rubicundulus Ve08.2h10
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