STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D0DBL1Unplaced genomic scaffold scaffold_1923, whole genome shotgun sequence. (261 aa)    
Predicted Functional Partners:
A0A0D0E278
Serine/threonine-protein kinase.
   
 
 0.794
A0A0D0DVL9
Histone H2A; Belongs to the histone H2A family.
    
 
 0.761
A0A0D0DEN6
Unplaced genomic scaffold scaffold_188, whole genome shotgun sequence.
    
 
 0.635
A0A0D0DHY7
Unplaced genomic scaffold scaffold_93, whole genome shotgun sequence; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
    
 
 0.635
A0A0D0DJ42
Unplaced genomic scaffold scaffold_939, whole genome shotgun sequence; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
    
 
 0.635
A0A0D0DNG8
Unplaced genomic scaffold scaffold_12, whole genome shotgun sequence; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
    
 
 0.635
A0A0D0DR12
Unplaced genomic scaffold scaffold_234, whole genome shotgun sequence; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
    
 
 0.635
A0A0D0DTC3
Unplaced genomic scaffold scaffold_527, whole genome shotgun sequence; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
    
 
 0.635
A0A0D0DW69
Unplaced genomic scaffold scaffold_37, whole genome shotgun sequence.
    
 
 0.635
A0A0D0E3S8
Unplaced genomic scaffold scaffold_527, whole genome shotgun sequence; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
    
 
 0.635
Your Current Organism:
Paxillus rubicundulus
NCBI taxonomy Id: 930991
Other names: P. rubicundulus Ve08.2h10, Paxillus rubicundulus Ve08.2h10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.