STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D0DDR1Unplaced genomic scaffold scaffold_1613, whole genome shotgun sequence. (254 aa)    
Predicted Functional Partners:
A0A0D0C412
Unplaced genomic scaffold scaffold_1980, whole genome shotgun sequence.
   
 
 0.685
A0A0D0DHV6
Unplaced genomic scaffold scaffold_95, whole genome shotgun sequence.
  
 
 0.666
A0A0D0E9D9
Unplaced genomic scaffold scaffold_41, whole genome shotgun sequence.
  
 
 0.666
A0A0D0E179
Unplaced genomic scaffold scaffold_113, whole genome shotgun sequence.
     
 0.634
A0A0D0BQM0
Unplaced genomic scaffold scaffold_4561, whole genome shotgun sequence; Belongs to the enoyl-CoA hydratase/isomerase family.
   
 
 0.576
A0A0D0C2A8
Unplaced genomic scaffold scaffold_2226, whole genome shotgun sequence.
   
 
 0.576
A0A0D0CF54
Unplaced genomic scaffold scaffold_993, whole genome shotgun sequence; Belongs to the enoyl-CoA hydratase/isomerase family.
   
 
 0.576
A0A0D0CW31
Unplaced genomic scaffold scaffold_1384, whole genome shotgun sequence; Belongs to the enoyl-CoA hydratase/isomerase family.
   
 
 0.576
A0A0D0E1J1
Unplaced genomic scaffold scaffold_101, whole genome shotgun sequence; Belongs to the enoyl-CoA hydratase/isomerase family.
   
 
 0.576
A0A0D0E9Y1
Unplaced genomic scaffold scaffold_27, whole genome shotgun sequence.
    
   0.575
Your Current Organism:
Paxillus rubicundulus
NCBI taxonomy Id: 930991
Other names: P. rubicundulus Ve08.2h10, Paxillus rubicundulus Ve08.2h10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.