STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D0DE33Unplaced genomic scaffold scaffold_205, whole genome shotgun sequence. (345 aa)    
Predicted Functional Partners:
A0A0D0DZV1
Unplaced genomic scaffold scaffold_421, whole genome shotgun sequence.
   
 0.998
CLP1
mRNA cleavage and polyadenylation factor CLP1; Required for endonucleolytic cleavage during polyadenylation- dependent pre-mRNA 3'-end formation.
   
 0.987
A0A0D0E766
Unplaced genomic scaffold scaffold_114, whole genome shotgun sequence.
   
 0.987
A0A0D0E9X3
Unplaced genomic scaffold scaffold_27, whole genome shotgun sequence.
   
 0.987
A0A0D0DX54
Cleavage and polyadenylation specificity factor subunit 2.
   
 0.986
A0A0D0E6I2
Unplaced genomic scaffold scaffold_8, whole genome shotgun sequence.
    
 0.986
A0A0D0E419
Unplaced genomic scaffold scaffold_50, whole genome shotgun sequence.
   
 0.985
A0A0D0DQX7
Unplaced genomic scaffold scaffold_893, whole genome shotgun sequence.
   
 0.983
A0A0D0E0G0
Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's.
    
 0.982
A0A0D0D5N1
Unplaced genomic scaffold scaffold_505, whole genome shotgun sequence.
    
 0.981
Your Current Organism:
Paxillus rubicundulus
NCBI taxonomy Id: 930991
Other names: P. rubicundulus Ve08.2h10, Paxillus rubicundulus Ve08.2h10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.