STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D0DFN6Unplaced genomic scaffold scaffold_158, whole genome shotgun sequence; Belongs to the arginase family. (397 aa)    
Predicted Functional Partners:
A0A0D0DZV8
Unplaced genomic scaffold scaffold_172, whole genome shotgun sequence; Belongs to the Orn/Lys/Arg decarboxylase class-II family.
  
 
 0.939
A0A0D0E0M7
Unplaced genomic scaffold scaffold_136, whole genome shotgun sequence; Belongs to the spermidine/spermine synthase family.
    
 0.899
A0A0D0DFJ2
Unplaced genomic scaffold scaffold_771, whole genome shotgun sequence; Belongs to the arginase family.
  
  
 
0.870
A0A0D0E8N3
Unplaced genomic scaffold scaffold_243, whole genome shotgun sequence.
  
 
 0.847
A0A0D0EBB5
Ornithine aminotransferase.
  
 0.818
A0A0D0EDC4
Unplaced genomic scaffold scaffold_3, whole genome shotgun sequence.
      0.814
A0A0D0E2W8
Unplaced genomic scaffold scaffold_72, whole genome shotgun sequence; Belongs to the aspartate/ornithine carbamoyltransferase superfamily.
   
 0.807
A0A0D0DT96
Unplaced genomic scaffold scaffold_136, whole genome shotgun sequence.
  
 
 0.779
A0A0D0DBY9
Unplaced genomic scaffold scaffold_936, whole genome shotgun sequence.
   
 
 0.776
A0A0D0DHC0
Unplaced genomic scaffold scaffold_754, whole genome shotgun sequence; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 0.773
Your Current Organism:
Paxillus rubicundulus
NCBI taxonomy Id: 930991
Other names: P. rubicundulus Ve08.2h10, Paxillus rubicundulus Ve08.2h10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.