STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D0DFS2Unplaced genomic scaffold scaffold_155, whole genome shotgun sequence. (206 aa)    
Predicted Functional Partners:
A0A0D0DY03
Unplaced genomic scaffold scaffold_247, whole genome shotgun sequence.
   
 0.976
A0A0D0DN45
Unplaced genomic scaffold scaffold_15, whole genome shotgun sequence.
    
 0.974
A0A0D0DPK1
Unplaced genomic scaffold scaffold_1088, whole genome shotgun sequence.
    
 0.974
A0A0D0EB28
Unplaced genomic scaffold scaffold_132, whole genome shotgun sequence.
   
 0.974
A0A0D0DZJ6
Unplaced genomic scaffold scaffold_189, whole genome shotgun sequence.
    
 0.972
A0A0D0DSU8
Unplaced genomic scaffold scaffold_573, whole genome shotgun sequence.
    
 0.971
A0A0D0DQW1
Unplaced genomic scaffold scaffold_896, whole genome shotgun sequence.
    
 0.941
A0A0D0DNA4
Unplaced genomic scaffold scaffold_375, whole genome shotgun sequence; Belongs to the ubiquitin-conjugating enzyme family.
    
 
 0.905
A0A0D0DW86
FACT complex subunit POB3; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment of [...]
    
 0.895
A0A0D0EC02
Unplaced genomic scaffold scaffold_68, whole genome shotgun sequence.
    
  0.882
Your Current Organism:
Paxillus rubicundulus
NCBI taxonomy Id: 930991
Other names: P. rubicundulus Ve08.2h10, Paxillus rubicundulus Ve08.2h10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.