STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D0DG68Unplaced genomic scaffold scaffold_143, whole genome shotgun sequence. (307 aa)    
Predicted Functional Partners:
A0A0D0DKZ5
Unplaced genomic scaffold scaffold_807, whole genome shotgun sequence.
    
 0.824
SUS1
Transcription and mRNA export factor SUS1; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. At the promoters, SAGA is required for recruitment of the basal transcription machinery. It influences RNA polymerase II transcriptional activity through different activities such as TBP interaction and promoter selectivity, interaction with transcription activators, and chromatin modification through histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex required for deubiquitination of [...]
    
 0.792
A0A0D0D942
Unplaced genomic scaffold scaffold_358, whole genome shotgun sequence.
    
 0.790
A0A0D0E0A5
Unplaced genomic scaffold scaffold_152, whole genome shotgun sequence.
    
 0.787
A0A0D0E275
Unplaced genomic scaffold scaffold_87, whole genome shotgun sequence; Belongs to the PI3/PI4-kinase family.
    
 0.781
A0A0D0E8G3
Unplaced genomic scaffold scaffold_69, whole genome shotgun sequence.
    
 0.780
A0A0D0E4Z5
Unplaced genomic scaffold scaffold_459, whole genome shotgun sequence.
    
 0.778
A0A0D0E3U1
Transcription initiation factor TFIID subunit 10; Functions as a component of the DNA-binding general transcription factor complex TFIID and the transcription regulatory histone acetylation (HAT) complexes SAGA and SLIK. Binding of TFIID to a promoter (with or without TATA element) is the initial step in preinitiation complex (PIC) formation. TFIID plays a key role in the regulation of gene expression by RNA polymerase II through different activities such as transcription activator interaction, core promoter recognition and selectivity, TFIIA and TFIIB interaction, chromatin modificati [...]
    
  0.771
A0A0D0E892
Unplaced genomic scaffold scaffold_76, whole genome shotgun sequence; Belongs to the peptidase C19 family.
    
 0.770
A0A0D0EAE7
Unplaced genomic scaffold scaffold_15, whole genome shotgun sequence.
    
  0.770
Your Current Organism:
Paxillus rubicundulus
NCBI taxonomy Id: 930991
Other names: P. rubicundulus Ve08.2h10, Paxillus rubicundulus Ve08.2h10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.