STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D0DGA5Unplaced genomic scaffold scaffold_140, whole genome shotgun sequence. (464 aa)    
Predicted Functional Partners:
A0A0D0DWP4
Unplaced genomic scaffold scaffold_680, whole genome shotgun sequence; Belongs to the SKP1 family.
   
 0.913
A0A0D0E003
Unplaced genomic scaffold scaffold_410, whole genome shotgun sequence.
    
 0.903
A0A0D0DY38
Unplaced genomic scaffold scaffold_8, whole genome shotgun sequence.
    
 0.889
A0A0D0DR49
Unplaced genomic scaffold scaffold_227, whole genome shotgun sequence; Belongs to the cullin family.
    
 0.888
A0A0D0DZP1
Unplaced genomic scaffold scaffold_433, whole genome shotgun sequence; Belongs to the cullin family.
    
 0.888
A0A0D0DZQ6
Unplaced genomic scaffold scaffold_179, whole genome shotgun sequence; Belongs to the cullin family.
    
 0.888
A0A0D0E7R6
Unplaced genomic scaffold scaffold_94, whole genome shotgun sequence.
    
 0.888
A0A0D0DBU5
Unplaced genomic scaffold scaffold_949, whole genome shotgun sequence; Belongs to the SKP1 family.
    
 0.885
A0A0D0D8E7
Unplaced genomic scaffold scaffold_377, whole genome shotgun sequence.
    
 0.847
A0A0D0DJV6
Unplaced genomic scaffold scaffold_884, whole genome shotgun sequence.
    
 0.847
Your Current Organism:
Paxillus rubicundulus
NCBI taxonomy Id: 930991
Other names: P. rubicundulus Ve08.2h10, Paxillus rubicundulus Ve08.2h10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.