STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D0DH28Unplaced genomic scaffold scaffold_1141, whole genome shotgun sequence. (352 aa)    
Predicted Functional Partners:
A0A0D0DDA3
Actin-related protein 8; Probably involved in transcription regulation via its interaction with the INO80 complex, a chromatin remodeling complex. Belongs to the actin family.
    
 0.878
A0A0D0DBW8
RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.
    
 0.852
A0A0D0DU92
Unplaced genomic scaffold scaffold_98, whole genome shotgun sequence.
    
 0.839
A0A0D0DG97
Unplaced genomic scaffold scaffold_141, whole genome shotgun sequence; Belongs to the actin family.
    
 0.837
A0A0D0CY98
Unplaced genomic scaffold scaffold_2794, whole genome shotgun sequence.
    
 0.836
A0A0D0E662
Unplaced genomic scaffold scaffold_13, whole genome shotgun sequence; Belongs to the actin family.
   
 0.835
A0A0D0DVL9
Histone H2A; Belongs to the histone H2A family.
   
 0.833
A0A0D0DFJ5
Unplaced genomic scaffold scaffold_163, whole genome shotgun sequence.
   
 0.824
A0A0D0E0P0
RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family.
    
 0.802
A0A0D0D606
Unplaced genomic scaffold scaffold_482, whole genome shotgun sequence.
    
 0.794
Your Current Organism:
Paxillus rubicundulus
NCBI taxonomy Id: 930991
Other names: P. rubicundulus Ve08.2h10, Paxillus rubicundulus Ve08.2h10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.