STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D0DIR8Unplaced genomic scaffold scaffold_978, whole genome shotgun sequence. (195 aa)    
Predicted Functional Partners:
A0A0D0DPM4
Lysophospholipase NTE1; Intracellular phospholipase B that catalyzes the double deacylation of phosphatidylcholine (PC) to glycerophosphocholine (GroPCho). Plays an important role in membrane lipid homeostasis.
   
 
  0.797
A0A0D0E521
Unplaced genomic scaffold scaffold_454, whole genome shotgun sequence.
    
   0.738
A0A0D0DWF4
Unplaced genomic scaffold scaffold_30, whole genome shotgun sequence.
   
 0.720
A0A0D0BWV8
Unplaced genomic scaffold scaffold_3056, whole genome shotgun sequence.
    
 
 0.663
A0A0D0EAW2
Unplaced genomic scaffold scaffold_140, whole genome shotgun sequence.
    
 
 0.663
A0A0D0CXD1
Unplaced genomic scaffold scaffold_1247, whole genome shotgun sequence.
    
 
 0.660
A0A0D0D1W5
Unplaced genomic scaffold scaffold_693, whole genome shotgun sequence.
     
 0.625
A0A0D0DG71
Unplaced genomic scaffold scaffold_143, whole genome shotgun sequence.
     
 0.599
A0A0D0DBW7
Unplaced genomic scaffold scaffold_1876, whole genome shotgun sequence.
     
 0.565
A0A0D0CPL3
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
   
 
 0.550
Your Current Organism:
Paxillus rubicundulus
NCBI taxonomy Id: 930991
Other names: P. rubicundulus Ve08.2h10, Paxillus rubicundulus Ve08.2h10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.