STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D0DJ09Cytosine-specific methyltransferase. (1296 aa)    
Predicted Functional Partners:
A0A0D0E343
Unplaced genomic scaffold scaffold_232, whole genome shotgun sequence.
  
 0.961
A0A0D0D8V6
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
   0.913
A0A0D0DLF1
Unplaced genomic scaffold scaffold_490, whole genome shotgun sequence.
   
 0.909
A0A0D0DY05
Unplaced genomic scaffold scaffold_246, whole genome shotgun sequence.
   
 0.909
A0A0D0E8L6
Unplaced genomic scaffold scaffold_246, whole genome shotgun sequence.
   
 0.909
A0A0D0CMQ5
Histone H3; Belongs to the histone H3 family.
    
 0.887
A0A0D0DMB2
Unplaced genomic scaffold scaffold_428, whole genome shotgun sequence.
    
 0.887
A0A0D0DQ85
Histone H3; Belongs to the histone H3 family.
    
 0.887
A0A0D0DVS1
Histone H3; Belongs to the histone H3 family.
    
 0.887
A0A0D0DWI4
Histone H3; Belongs to the histone H3 family.
    
 0.887
Your Current Organism:
Paxillus rubicundulus
NCBI taxonomy Id: 930991
Other names: P. rubicundulus Ve08.2h10, Paxillus rubicundulus Ve08.2h10
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