STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D0DJE5Unplaced genomic scaffold scaffold_68, whole genome shotgun sequence. (210 aa)    
Predicted Functional Partners:
A0A0D0BXX4
Unplaced genomic scaffold scaffold_2901, whole genome shotgun sequence.
    
 0.808
A0A0D0DSE7
Unplaced genomic scaffold scaffold_168, whole genome shotgun sequence.
     
 0.787
A0A0D0DXP8
Unplaced genomic scaffold scaffold_13, whole genome shotgun sequence.
     
 0.741
A0A0D0DE08
Unplaced genomic scaffold scaffold_208, whole genome shotgun sequence; Belongs to the mitochondrial carrier (TC 2.A.29) family.
     
 0.725
A0A0D0E1E5
Unplaced genomic scaffold scaffold_106, whole genome shotgun sequence.
     
 0.714
A0A0D0DK02
Unplaced genomic scaffold scaffold_738, whole genome shotgun sequence; Belongs to the AAA ATPase family.
   
 
 0.698
A0A0D0DUS6
Unplaced genomic scaffold scaffold_408, whole genome shotgun sequence.
     
 0.696
A0A0D0E7J6
Peroxisomal membrane protein PEX16.
     
 0.692
A0A0D0DWJ5
Unplaced genomic scaffold scaffold_28, whole genome shotgun sequence.
   
 
 0.684
A0A0D0E8H8
Unplaced genomic scaffold scaffold_253, whole genome shotgun sequence.
   
 
 0.684
Your Current Organism:
Paxillus rubicundulus
NCBI taxonomy Id: 930991
Other names: P. rubicundulus Ve08.2h10, Paxillus rubicundulus Ve08.2h10
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