STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D0DJJ1Unplaced genomic scaffold scaffold_65, whole genome shotgun sequence. (157 aa)    
Predicted Functional Partners:
A0A0D0E0E5
Unplaced genomic scaffold scaffold_380, whole genome shotgun sequence.
   
  0.873
A0A0D0DHK2
Unplaced genomic scaffold scaffold_100, whole genome shotgun sequence; Belongs to the universal ribosomal protein uS5 family.
    
 0.869
A0A0D0DSZ5
Unplaced genomic scaffold scaffold_560, whole genome shotgun sequence; Belongs to the universal ribosomal protein uS5 family.
    
 0.869
A0A0D0DB58
40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.
   
  0.867
A0A0D0E8H4
40S ribosomal protein S27.
    
  0.861
A0A0D0CY68
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
    
  0.857
A0A0D0DT75
40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.
    
  0.857
RPS1
40S ribosomal protein S1; Belongs to the eukaryotic ribosomal protein eS1 family.
   
  0.857
A0A0D0EBW8
40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.
    
  0.857
A0A0D0EAM3
Unplaced genomic scaffold scaffold_11, whole genome shotgun sequence.
   
 0.850
Your Current Organism:
Paxillus rubicundulus
NCBI taxonomy Id: 930991
Other names: P. rubicundulus Ve08.2h10, Paxillus rubicundulus Ve08.2h10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.