STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D0DJK5Unplaced genomic scaffold scaffold_65, whole genome shotgun sequence. (624 aa)    
Predicted Functional Partners:
A0A0D0CSD7
Unplaced genomic scaffold scaffold_1816, whole genome shotgun sequence; Belongs to the argonaute family.
    
 
 0.665
A0A0D0D7J1
Unplaced genomic scaffold scaffold_414, whole genome shotgun sequence.
    
 
 0.665
A0A0D0DAM9
Unplaced genomic scaffold scaffold_1066, whole genome shotgun sequence; Belongs to the argonaute family.
    
 
 0.665
A0A0D0DXB8
Unplaced genomic scaffold scaffold_268, whole genome shotgun sequence; Belongs to the argonaute family.
    
 
 0.665
A0A0D0ED82
Unplaced genomic scaffold scaffold_7, whole genome shotgun sequence.
    
 
 0.665
A0A0D0EAT6
Unplaced genomic scaffold scaffold_7, whole genome shotgun sequence.
    
 0.654
A0A0D0DXW9
Unplaced genomic scaffold scaffold_575, whole genome shotgun sequence; Belongs to the adaptor complexes medium subunit family.
    
  0.640
A0A0D0DCU0
NADH-ubiquinone oxidoreductase; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.
    
  0.602
A0A0D0DXW6
Unplaced genomic scaffold scaffold_11, whole genome shotgun sequence.
    
 0.595
A0A0D0DWF4
Unplaced genomic scaffold scaffold_30, whole genome shotgun sequence.
    
 0.593
Your Current Organism:
Paxillus rubicundulus
NCBI taxonomy Id: 930991
Other names: P. rubicundulus Ve08.2h10, Paxillus rubicundulus Ve08.2h10
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