STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D0DK79Unplaced genomic scaffold scaffold_551, whole genome shotgun sequence; Belongs to the multicopper oxidase family. (508 aa)    
Predicted Functional Partners:
A0A0D0DRE1
Unplaced genomic scaffold scaffold_215, whole genome shotgun sequence.
   
 
 0.760
A0A0D0DWV1
Unplaced genomic scaffold scaffold_25, whole genome shotgun sequence.
    
   0.734
A0A0D0DM04
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.
   
 0.707
A0A0D0DWX1
Unplaced genomic scaffold scaffold_658, whole genome shotgun sequence.
    
 0.676
A0A0D0DDP5
Unplaced genomic scaffold scaffold_804, whole genome shotgun sequence; Belongs to the STXBP/unc-18/SEC1 family.
     
 0.576
A0A0D0DVV2
Unplaced genomic scaffold scaffold_46, whole genome shotgun sequence.
     
 0.573
A0A0D0DG94
Unplaced genomic scaffold scaffold_141, whole genome shotgun sequence.
   
 
  0.539
A0A0D0E4I4
Unplaced genomic scaffold scaffold_42, whole genome shotgun sequence; Belongs to the small GTPase superfamily. SAR1 family.
     
 0.535
A0A0D0EBD5
Unplaced genomic scaffold scaffold_114, whole genome shotgun sequence.
     
 0.535
A0A0D0DT05
Protein transport protein sec16; Involved in the initiation of assembly of the COPII coat required for the formation of transport vesicles from the endoplasmic reticulum (ER) and the selection of cargo molecules. Also involved in autophagy; Belongs to the SEC16 family.
   
 
  0.534
Your Current Organism:
Paxillus rubicundulus
NCBI taxonomy Id: 930991
Other names: P. rubicundulus Ve08.2h10, Paxillus rubicundulus Ve08.2h10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.