STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D0DLK3Unplaced genomic scaffold scaffold_36, whole genome shotgun sequence. (1319 aa)    
Predicted Functional Partners:
A0A0D0DXW9
Unplaced genomic scaffold scaffold_575, whole genome shotgun sequence; Belongs to the adaptor complexes medium subunit family.
    
 0.956
A0A0D0DEF0
Unplaced genomic scaffold scaffold_195, whole genome shotgun sequence.
   
 0.954
A0A0D0E704
AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.
    
 0.939
A0A0D0DPJ0
Unplaced genomic scaffold scaffold_1, whole genome shotgun sequence.
   
 0.932
A0A0D0E9G2
Unplaced genomic scaffold scaffold_40, whole genome shotgun sequence.
    
 0.931
A0A0D0EAD4
Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.
   
 0.922
A0A0D0D4E5
Unplaced genomic scaffold scaffold_571, whole genome shotgun sequence.
    
 
 0.898
A0A0D0DM70
Unplaced genomic scaffold scaffold_777, whole genome shotgun sequence.
    
 0.898
A0A0D0DLG3
AP complex subunit beta; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration.
   
 0.897
A0A0D0E9L9
AP complex subunit beta; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration.
   
 0.897
Your Current Organism:
Paxillus rubicundulus
NCBI taxonomy Id: 930991
Other names: P. rubicundulus Ve08.2h10, Paxillus rubicundulus Ve08.2h10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.