STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D0DLR3Unplaced genomic scaffold scaffold_33, whole genome shotgun sequence. (221 aa)    
Predicted Functional Partners:
A0A0D0CAY1
Unplaced genomic scaffold scaffold_1306, whole genome shotgun sequence.
    
 0.866
A0A0D0DTS8
Unplaced genomic scaffold scaffold_115, whole genome shotgun sequence.
    
 0.862
A0A0D0E4Y5
Unplaced genomic scaffold scaffold_34, whole genome shotgun sequence.
   
 0.832
A0A0D0E5T7
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
    
 0.830
A0A0D0DYG7
Unplaced genomic scaffold scaffold_539, whole genome shotgun sequence.
    
 0.827
A0A0D0DXG7
Unplaced genomic scaffold scaffold_16, whole genome shotgun sequence.
    
 0.794
A0A0D0DWD1
Unplaced genomic scaffold scaffold_732, whole genome shotgun sequence; Belongs to the WD repeat SEC13 family.
    
 0.788
A0A0D0E116
Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).
    
 0.781
A0A0D0CY96
Unplaced genomic scaffold scaffold_1160, whole genome shotgun sequence.
    
 0.780
A0A0D0DXW4
Unplaced genomic scaffold scaffold_11, whole genome shotgun sequence.
    
 0.779
Your Current Organism:
Paxillus rubicundulus
NCBI taxonomy Id: 930991
Other names: P. rubicundulus Ve08.2h10, Paxillus rubicundulus Ve08.2h10
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