STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D0DLV8Unplaced genomic scaffold scaffold_31, whole genome shotgun sequence. (636 aa)    
Predicted Functional Partners:
A0A0D0DR66
Unplaced genomic scaffold scaffold_226, whole genome shotgun sequence; Belongs to the universal ribosomal protein uL13 family.
    
 
 0.907
A0A0D0DJR3
Unplaced genomic scaffold scaffold_61, whole genome shotgun sequence; Belongs to the universal ribosomal protein uL3 family.
   
 
 0.906
A0A0D0CEH5
Unplaced genomic scaffold scaffold_1041, whole genome shotgun sequence.
    
   0.903
A0A0D0DBG6
Unplaced genomic scaffold scaffold_731, whole genome shotgun sequence.
    
   0.903
A0A0D0E2N9
Unplaced genomic scaffold scaffold_602, whole genome shotgun sequence.
    
   0.903
A0A0D0E706
Unplaced genomic scaffold scaffold_346, whole genome shotgun sequence; Belongs to the bacterial ribosomal protein bL17 family.
    
   0.903
A0A0D0ECS9
Unplaced genomic scaffold scaffold_25, whole genome shotgun sequence.
    
   0.903
A0A0D0CVU9
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 0.900
A0A0D0DEP9
Unplaced genomic scaffold scaffold_187, whole genome shotgun sequence.
   
   0.894
A0A0D0DME2
Unplaced genomic scaffold scaffold_25, whole genome shotgun sequence.
   
   0.893
Your Current Organism:
Paxillus rubicundulus
NCBI taxonomy Id: 930991
Other names: P. rubicundulus Ve08.2h10, Paxillus rubicundulus Ve08.2h10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.