A0A0D0DMB1 protein (Paxillus rubicundulus) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

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Textmining

[Homology]

Score

A0A0D0DMB1

Unplaced genomic scaffold scaffold_1427, whole genome shotgun sequence. (256 aa)

Predicted Functional Partners:

A0A0D0E8D6

0.525

A0A0D0E6P8

0.520

A0A0D0DTD6

0.497

A0A0D0E2N9

0.496

A0A0D0CCG4

0.487

A0A0D0CEH5

0.487

A0A0D0CGN0

0.487

A0A0D0D1X6

0.487

A0A0D0D2P5

0.487

A0A0D0D2R4

0.487

Your Current Organism:

Paxillus rubicundulus

NCBI taxonomy Id: 930991
Other names: P. rubicundulus Ve08.2h10, Paxillus rubicundulus Ve08.2h10

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structured XML interaction data, according to the 'PSI-MI' data standard

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A0D0CCG4	A0A0D0CEH5	Unplaced genomic scaffold scaffold_1193, whole genome shotgun sequence; Belongs to the universal ribosomal protein uL16 family.	Unplaced genomic scaffold scaffold_1041, whole genome shotgun sequence.	0.996
A0A0D0CCG4	A0A0D0CGN0	Unplaced genomic scaffold scaffold_1193, whole genome shotgun sequence; Belongs to the universal ribosomal protein uL16 family.	Unplaced genomic scaffold scaffold_896, whole genome shotgun sequence; Belongs to the universal ribosomal protein uS19 family.	0.968
A0A0D0CCG4	A0A0D0D1X6	Unplaced genomic scaffold scaffold_1193, whole genome shotgun sequence; Belongs to the universal ribosomal protein uL16 family.	Unplaced genomic scaffold scaffold_863, whole genome shotgun sequence.	0.988
A0A0D0CCG4	A0A0D0D2P5	Unplaced genomic scaffold scaffold_1193, whole genome shotgun sequence; Belongs to the universal ribosomal protein uL16 family.	Unplaced genomic scaffold scaffold_822, whole genome shotgun sequence.	0.994
A0A0D0CCG4	A0A0D0D2R4	Unplaced genomic scaffold scaffold_1193, whole genome shotgun sequence; Belongs to the universal ribosomal protein uL16 family.	Unplaced genomic scaffold scaffold_651, whole genome shotgun sequence.	0.989
A0A0D0CCG4	A0A0D0DMB1	Unplaced genomic scaffold scaffold_1193, whole genome shotgun sequence; Belongs to the universal ribosomal protein uL16 family.	Unplaced genomic scaffold scaffold_1427, whole genome shotgun sequence.	0.487
A0A0D0CCG4	A0A0D0DTD6	Unplaced genomic scaffold scaffold_1193, whole genome shotgun sequence; Belongs to the universal ribosomal protein uL16 family.	Unplaced genomic scaffold scaffold_131, whole genome shotgun sequence.	0.995
A0A0D0CCG4	A0A0D0E2N9	Unplaced genomic scaffold scaffold_1193, whole genome shotgun sequence; Belongs to the universal ribosomal protein uL16 family.	Unplaced genomic scaffold scaffold_602, whole genome shotgun sequence.	0.997
A0A0D0CCG4	A0A0D0E8D6	Unplaced genomic scaffold scaffold_1193, whole genome shotgun sequence; Belongs to the universal ribosomal protein uL16 family.	Unplaced genomic scaffold scaffold_72, whole genome shotgun sequence.	0.921
A0A0D0CEH5	A0A0D0CCG4	Unplaced genomic scaffold scaffold_1041, whole genome shotgun sequence.	Unplaced genomic scaffold scaffold_1193, whole genome shotgun sequence; Belongs to the universal ribosomal protein uL16 family.	0.996
A0A0D0CEH5	A0A0D0CGN0	Unplaced genomic scaffold scaffold_1041, whole genome shotgun sequence.	Unplaced genomic scaffold scaffold_896, whole genome shotgun sequence; Belongs to the universal ribosomal protein uS19 family.	0.950
A0A0D0CEH5	A0A0D0D1X6	Unplaced genomic scaffold scaffold_1041, whole genome shotgun sequence.	Unplaced genomic scaffold scaffold_863, whole genome shotgun sequence.	0.987
A0A0D0CEH5	A0A0D0D2P5	Unplaced genomic scaffold scaffold_1041, whole genome shotgun sequence.	Unplaced genomic scaffold scaffold_822, whole genome shotgun sequence.	0.987
A0A0D0CEH5	A0A0D0D2R4	Unplaced genomic scaffold scaffold_1041, whole genome shotgun sequence.	Unplaced genomic scaffold scaffold_651, whole genome shotgun sequence.	0.989
A0A0D0CEH5	A0A0D0DMB1	Unplaced genomic scaffold scaffold_1041, whole genome shotgun sequence.	Unplaced genomic scaffold scaffold_1427, whole genome shotgun sequence.	0.487
A0A0D0CEH5	A0A0D0DTD6	Unplaced genomic scaffold scaffold_1041, whole genome shotgun sequence.	Unplaced genomic scaffold scaffold_131, whole genome shotgun sequence.	0.987
A0A0D0CEH5	A0A0D0E2N9	Unplaced genomic scaffold scaffold_1041, whole genome shotgun sequence.	Unplaced genomic scaffold scaffold_602, whole genome shotgun sequence.	0.991
A0A0D0CEH5	A0A0D0E8D6	Unplaced genomic scaffold scaffold_1041, whole genome shotgun sequence.	Unplaced genomic scaffold scaffold_72, whole genome shotgun sequence.	0.937
A0A0D0CGN0	A0A0D0CCG4	Unplaced genomic scaffold scaffold_896, whole genome shotgun sequence; Belongs to the universal ribosomal protein uS19 family.	Unplaced genomic scaffold scaffold_1193, whole genome shotgun sequence; Belongs to the universal ribosomal protein uL16 family.	0.968
A0A0D0CGN0	A0A0D0CEH5	Unplaced genomic scaffold scaffold_896, whole genome shotgun sequence; Belongs to the universal ribosomal protein uS19 family.	Unplaced genomic scaffold scaffold_1041, whole genome shotgun sequence.	0.950